Scientific publications from Image Analysis and Computer Graphics section

Motion Tracking for Medical Imaging: A Non-Visible Structured Light Tracking Approach

Olesen, Oline Vinter ; Paulsen, Rasmus Reinhold ; Højgaard, Liselotte ; Roed, Bjarne ; Larsen, Rasmus

in journal: I E E E Transactions on Medical Imaging (ISSN: 0278-0062) (DOI: http://dx.doi.org/10.1109/TMI.2011.2165157), vol: 31, issue: 1, pages: 79-87, 2012

Type: Journal article - Journal article

DOI: 10.1109/TMI.2011.2165157

Motion analysis of optically trapped particles and cells using 2D Fourier analysis

Kristensen, Martin Verner ; Ahrendt, Peter ; Lindballe, Thue Bjerring ; Nielsen, Otto Højager Attermann ; Kylling, Anton P. ; Karstoft, Henrik ; Imparato, Alberto ; Hosta-Rigau, Leticia ; Stadler, Brigitte ; Stapelfeldt, Henrik ; Keiding, Søren Rud

in journal: Optics Express (ISSN: 1094-4087) (DOI: http://dx.doi.org/10.1364/OE.20.001953), vol: 20, issue: 3, pages: 1953-1962, 2012

Type: Journal article - Journal article

DOI: 10.1364/OE.20.001953

Classification of Pansharpened Urban Satellite Images

Palsson, Frosti ; Sveinsson, Johannes R. ; Benediktsson, Jon Atli ; Aanæs, Henrik

in journal: I E E E Journal of Selected Topics in Applied Earth Observations and Remote Sensing (ISSN: 1939-1404) (DOI: http://dx.doi.org/10.1109/JSTARS.2011.2176467), vol: 5, issue: 1, pages: 281-297, 2012

Type: Journal article - Journal article

DOI: 10.1109/JSTARS.2011.2176467

Automatic Quality Measurement and Parameter Selection for Example-based Texture Synthesis

Laursen, Lasse Farnung ; Clemmensen, Line Katrine Harder ; Bærentzen, J. Andreas ; Igarashi, T. ; Ersbøll, Bjarne Kjær

Type: Report - Report

Dosimetric- and geometric evaluation of adaptive H&N IMRT using deformable image registration

Eiland, R. B. ; Behrens, C. F. ; Sjöström, D. ; Maare, C. ; Paulsen, Rasmus Reinhold ; Samsoe, E.

Type: Poster - Poster

Presented at: ESTRO 31, Barcelona

Statistical analysis of MRI-only based dose planning

Korsholm, M. E. ; Waring, L. W. ; Paulsen, Rasmus Reinhold ; Edmund, J. M.

Type: Poster - Poster

Presented at: ESTRO 31, Barcelona

Digital Prototyping of Milk Products

Frisvad, Jeppe Revall ; Nielsen, Otto Højager Attermann ; Skytte, Jacob Lercke ; Misztal, Marek Krzysztof ; Dahl, Anders Lindbjerg

part of: Proceedings of the 14th Food Colloids Conference 2012, pages: P53, 2012, University of Copenhagen,

Type: Conference abstract in proceedings - Conference abstract in proceedings

Presented at: Food Colloids 2012, Copenhagen

Monitoring structure development in milk acidification using diffuse reflectance profiles

Skytte, Jacob Lercke ; Andersen, Ulf ; Møller, Flemming ; Nielsen, Otto Højager Attermann ; Carstensen, Jens Michael ; Dahl, Anders Lindbjerg ; Larsen, Rasmus

part of: Proceedings of the 14th Food Colloids Conference 2012, 2012, University of Copenhagen,

Type: Conference abstract in proceedings - Conference abstract in proceedings

Presented at: Food Colloids 2012, Copenhagen

Classification of parasite eggs used as an active pharmaceutical ingredient (API)

Bruun, J. M. ; Carstensen, Jens Michael ; Thamsborg, S. ; Roepstorff, A. ; Christensen, S. ; Kapel, C. M. O.

part of: Joint Spring Symposium 2012 - Double burden of disease – how parasites interact with each other, their host and the society, pages: 7, 2012, Danish Society for Parasitology,

Type: Conference abstract in proceedings - Conference abstract in proceedings

Presented at: Joint Spring Symposium 2012 - Double burden of disease – how parasites interact with each other, their host and the society, Frederiksberg

Anatomical Connectivity Mapping – Measuring connectivity changes in Multiple Sclerosis

Lyksborg, Mark ; Larsen, Rasmus ; Sørensen, P. S. ; Blinkenberg, M. ; Dogonowski, A. ; Garde, E. ; Parker, G. J. M. ; Siebner, H. R. ; Dyrby, T.B.

part of: 2012 Annual Meeting Proceedings, 2012, The International Society for Magnetic Resonance in Medicine,

Type: Article in proceedings - Article in proceedings

Presented at: ISMRM 20th Annual Meeting & Exhibition, Melbourne

Topology Adaptive Interface Tracking Using the Deformable Simplicial Complex

Misztal, Marek Krzysztof ; Bærentzen, J. Andreas

in journal: A C M Transactions on Graphics (ISSN: 0730-0301) (DOI: http://dx.doi.org/10.1145/2167076.2167082), vol: 31, issue: 3, pages: No. 24, 2012

Type: Journal article - Journal article

DOI: 10.1145/2167076.2167082

Automatic quantification of iris color

Christoffersen, S. ; Harder, Stine ; Andersen, J. D. ; Johansen, P. ; Dahl, Anders Lindbjerg ; Morling, N. ; Paulsen, Rasmus Reinhold

part of: Meeting of the English Speaking Working Group (ESWG) of the International Society of Forensic Genetics (ISFG), pages: 20, 2012,

Type: Conference abstract in proceedings - Conference abstract in proceedings

Presented at: Meeting of the English Speaking Working Group (ESWG) of the International Society of Forensic Genetics (ISFG), Copenhagen

Guide to Computational Geometry Processing

Bærentzen, J. Andreas ; Gravesen, Jens ; Anton, François ; Aanæs, Henrik

Type: Book - Book

DOI: 10.1007/978-1-4471-4075-7

Predicting the Appearance of Materials Using Lorenz-Mie Theory

Frisvad, Jeppe Revall ; Christensen, Niels Jørgen ; Jensen, Henrik Wann

part of: The Mie Theory (ISBN: 978-3-642-28737-4), pages: 101-133, 2012, Springer,

Type: Book chapter - Book chapter

DOI: 10.1007/978-3-642-28738-1_4

Detection and classification of parasite eggs for use in helminthic therapy

Bruun, Johan Musaeus ; Kapel, Christian M. O. ; Carstensen, Jens Michael

part of: 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI) (ISBN: 978-1-4577-1857-1), pages: 1627-1630, 2012,

Type: Article in proceedings - Article in proceedings

Presented at: IEEE 9th International Symposium on Biomedical Imaging (ISBI 2012), Barcelona

DOI: 10.1109/ISBI.2012.6235888

Building an Orthonormal Basis from a 3D Unit Vector Without Normalization

Frisvad, Jeppe Revall

in journal: Journal of Graphics Tools (ISSN: 1086-7651) (DOI: http://dx.doi.org/10.1080/2165347X.2012.689606), vol: 16, issue: 3, pages: 151–159, 2012

Type: Journal article - Journal article

DOI: 10.1080/2165347X.2012.689606

Real-Time Rendering of Teeth with No Preprocessing

Larsen, Christian Thode ; Frisvad, Jeppe Revall ; Jensen, Peter Dahl Ejby ; Bærentzen, J. Andreas

part of: Advances in Visual Computing (ISBN: 978-3-642-33190-9), pages: 334-345, 2012, Springer,

Type: Article in proceedings - Article in proceedings

Presented at: 8th International Symposium on Visual Computing, Rethymnon

DOI: 10.1007/978-3-642-33191-6_33

Planning and Evaluation of Radio-Therapeutic Treatment of Head-and-Neck Cancer Using PET/CT scanning

Hollensen, Christian ; Larsen, Rasmus ; Højgaard, Liselotte

Type: Ph.d. thesis - Ph.d. thesis

Geometrical Comparison Measures for Tumor Delineation, what do they mean for the Actual Dosis Plan?

Hollensen, Christian ; Persson, G. ; Højgaard, L. ; Specht, L. ; Larsen, Rasmus

in journal: Radiotherapy & Oncology (ISSN: 0167-8140) (DOI: http://dx.doi.org/10.1016/S0167-8140(12)71127-1), vol: 103, issue: Supplement 1, pages: S308, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: ESTRO 31, Barcelona

DOI: 10.1016/S0167-8140(12)71127-1

Demons Registration of CT Volume and CBCT Projections for Adaptive Radiotherapy: Avoiding CBCT Reconstruction

Bjerre, Troels ; Aznar, M. ; Munck af Rosenschöld, P. ; Specht, L. ; Larsen, Rasmus ; Fogtmann, M. O.

in journal: Radiotherapy & Oncology (ISSN: 0167-8140) (DOI: http://dx.doi.org/10.1016/S0167-8140(12)71804-2), vol: 103, issue: Supplement 1, pages: S561, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: ESTRO 31, Barcelona

DOI: 10.1016/S0167-8140(12)71804-2

Mesh Processing in Medical Image Analysis

Levine, Joshua A. ; Paulsen, Rasmus Reinhold ; Zhang, Yongjie

Type: Book - Book

DOI: 10.1007/978-3-642-33463-4

Gender Recognition Using Cognitive Modeling

Fagertun, Jens ; Andersen, Tobias ; Paulsen, Rasmus Reinhold

part of: Computer Vision – ECCV 2012 (ISBN: 978-3-642-33867-0), pages: 300-308, 2012, Springer,

Type: Article in proceedings - Article in proceedings

Presented at: 12th European Conference on Computer Vision (ECCV 2012), Florence

DOI: 10.1007/978-3-642-33868-7_30

A Feasible Real-time Multiplane MRI-LINAC Guidance Strategy

Bjerre, Troels ; Kim, T. ; Munck af Rosenschold, P. ; Aznar, M. ; Specht, L. ; Larsen, Rasmus ; Keall, P.

in journal: International Journal of Radiation: Oncology - Biology - Physics (ISSN: 0360-3016) (DOI: http://dx.doi.org/10.1016/j.ijrobp.2012.07.1924), vol: 84, issue: 3, Supplement 1, pages: S719, 2012

Type: Conference article - Conference article

Presented at: ASTRO's 54th Annual Meeting, Boston, Massachusetts

DOI: 10.1016/j.ijrobp.2012.07.1924

Adaptive RT for H&N Cancer: The Usefulness of Deformable Image Registration

Behrens, C.F. ; Eiland, R.B. ; Sjöström, D. ; Maare, C. ; Paulsen, Rasmus Reinhold ; Samsøe, E.

Type: Poster - Poster

Presented at: American Society for Radiation Oncology 54th Annual Meeting, ASTRO's 54th Annual Meeting, Boston, MA

Linear and kernel methods for multivariate change detection

Canty, Morton J. ; Nielsen, Allan Aasbjerg

in journal: Computers & Geosciences (ISSN: 0098-3004) (DOI: http://dx.doi.org/10.1016/j.cageo.2011.05.012), vol: 38, issue: 1, pages: 107-114, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.cageo.2011.05.012

Non-invasive Estimation of Metabolic Uptake Rate of Glucose using F18-FDG PET and Linear Transformation of Outputs

Christensen, Anders Nymark ; Reichkendler, M. ; Auerback, P. ; Larsen, Rasmus ; Nielsen, H. ; Ploug, T. ; Stallknecht, B. ; Højgaard, L. ; Holm, S.

Type: Conference abstract for conference - Conference abstract for conference

Presented at: 25th Annual EANM Congress, Milan

Optimal Class Separation in Hyperspectral Image Data: Iterated Canonical Discriminant Analysis

Nielsen, Allan Aasbjerg ; Müller, Andreas

Type: Paper - Paper

Presented at: Third Annual Hyperspectral Imaging Conference (HSI2012)

Generic Graph Grammar: A Simple Grammar for Generic Procedural Modelling

Christiansen, Asger Nyman ; Bærentzen, J. Andreas

part of: Proceedings of the 28th Spring conference on Computer Graphics, pages: 85-92, 2012,

Type: Article in proceedings - Article in proceedings

Presented at: 28th Spring conference on Computer Graphics, Smolenice

Automated invariant alignment to improve canonical variates in image fusion of satellite and weather radar data

Vestergaard, Jacob Schack ; Nielsen, Allan Aasbjerg

in journal: Journal of Applied Meteorology and Climatology (ISSN: 1558-8424) (DOI: http://dx.doi.org/10.1175/JAMC-D-12-05.1), 2012

Type: Journal article - Journal article

DOI: 10.1175/JAMC-D-12-05.1

Improved Nowcasting of Heavy Precipitation Using Satellite and Weather Radar Data

Vestergaard, Jacob Schack

Type: Poster - Poster

Presented at: Grøn Dyst : Månedens grønne projekt, Kgs. Lyngby

Exploring methods for combining altimetry with other data to extend the 20-year altimetric record onto a 50 year timescale

Svendsen, Peter Limkilde ; Andersen, Ole Baltazar ; Nielsen, Allan Aasbjerg ; Knudsen, Per

Type: Conference abstract for conference - Conference abstract for conference

Presented at: 2012 AGU Fall Meeting, San Francisco

Interactive topology optimization

Aage, Niels ; Nobel-Jørgensen, Morten ; Andreasen, Casper Schousboe ; Sigmund, Ole

Type: Conference abstract for conference - Conference abstract for conference

Presented at: 6th European Congress on Computational Methods in Applied Sciences and Engineering, Vienna

A generative model for probabilistic label fusion of multimodal data

Iglesias, Juan Eugenio ; Sabuncu, Mert Rory ; Van Leemput, Koen

part of: Multimodal Brain Image Analysis (ISBN: 978-3-642-33529-7), pages: 115–133, 2012, Springer,

Type: Article in proceedings - Article in proceedings

Presented at: 15th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2012) : Workshop on Multimodal Brain Image Analysis (MBIA), Nice

DOI: 10.1007/978-3-642-33530-3_10

The Relevance Voxel Machine (RVoxM): A Self-Tuning Bayesian Model for Informative Image-Based Prediction

Sabuncu, Mert R. ; Van Leemput, Koen

in journal: I E E E Transactions on Medical Imaging (ISSN: 0278-0062) (DOI: http://dx.doi.org/10.1109/TMI.2012.2216543), vol: 31, issue: 12, pages: 2290-2306, 2012

Type: Journal article - Journal article

DOI: 10.1109/TMI.2012.2216543

Does the Progress in Radiation Therapy Make Higher Demand to Interobserver Variability Correction? A Case Study of IMRT and Volumetric Arc Therapy

Hollensen, Christian ; Persson, G. ; Højgaard, L. ; Specht, L. ; Larsen, Rasmus

in journal: International Journal of Radiation: Oncology - Biology - Physics (ISSN: 0360-3016) (DOI: http://dx.doi.org/10.1016/j.ijrobp.2012.07.190), vol: 84, issue: 3, Supplement 1, pages: S111, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: American Society for Radiation Oncology 54th Annual Meeting, ASTRO's 54th Annual Meeting, Boston, MA

DOI: 10.1016/j.ijrobp.2012.07.190

Hyperspectral Image Analysis of Food Quality

Arngren, Morten ; Larsen, Jan ; Larsen, Rasmus

Type: Ph.d. thesis - Ph.d. thesis

Multispectral imaging as a potential tool for seed health testing of spinach (Spinacia oleracea L.)

Olesen, M. Halkjaer ; Carstensen, Jens Michael ; Boelt, B.

in journal: Seed Science and Technology (ISSN: 0251-0952), vol: 39, issue: 1, pages: 140-150, 2011

Type: Journal article - Journal article

Automated quantification and analysis of facial asymmetry in children with arthritis in the temporomandibular joint

Darvann, Tron A. ; Hermann, Nuno V. ; Demant, Sune ; Larsen, Per ; Ólafsdóttir, Hildur ; Thorup, Signe Strann ; Zak, Marek ; Lipira, Angelo B. ; Kane, Alex A. ; Govier, Daniel ; Schatz, Helena ; Rueckert, Daniel ; Kreiborg, Sven

part of: 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBN: 978-1-4244-4127-3), pages: 1193-1196, 2011, IEEE,

Type: Article in proceedings - Article in proceedings

Presented at: 8th IEEE International Symposium on Biomedical Imaging, Chicago, IL

DOI: 10.1109/ISBI.2011.5872615

Scandinavian Workshop on Imaging Food Quality 2011

Clemmensen, Line Katrine Harder ; Parkkinen, Jussi ; Hardeberg, Jon Yngve ; Larsen, Rasmus ; Ersbøll, Bjarne Kjær

Type: Report - Report

Classication Methods for CT-Scanned Carcass Midsections

Skytte, Jacob Lercke ; Dahl, Anders Lindbjerg ; Larsen, Rasmus ; Christensen, Lars Bager ; Ersbøll, Bjarne Kjær

part of: Scandinavian Workshop on Imaging Food Quality 2011, pages: 41-46, 2011, Technical University of Denmark, Kgs. Lyngby, Denmark

Type: Article in proceedings - Article in proceedings

Presented at: Scandinavian Workshop on Imaging Food Quality, Ystad, Sweden

Project Supervision – An Engineering Approach

Paulsen, Rasmus Reinhold ; Larsen, Rasmus ; Ersbøll, Bjarne Kjær ; Conradsen, Knut

part of: Proceedings of the 7th International CDIO Conference, Technical University of Denmark, Copenhagen, June 20 - 23, 2011, 2011, Technical University of Denmark, Lyngby

Type: Article in proceedings - Article in proceedings

Presented at: 7th International CDIO Conference, Copenhagen

DOI: 10.4122/1.1000054555

Efficient Hyperelastic Regularization for Registration

Darkner, Sune ; Hansen, Michael Sass ; Larsen, Rasmus ; Hansen, Mads Fogtmann

part of: Image Analysis (ISBN: 978-3-642-21226-0), pages: 295-305, 2011, Springer,

Type: Article in proceedings - Article in proceedings

Presented at: 17th Scandinavian Conference on Image Analysis (SCIA), Ystad

DOI: 10.1007/978-3-642-21227-7_28

Anisotropic 3D texture synthesis with application to volume rendering

Laursen, Lasse Farnung ; Ersbøll, Bjarne Kjær ; Bærentzen, J. Andreas

part of: WSCG' 2011 Communication Papers Proceedings (ISBN: 978-80-86943-82-4), pages: 49-57, 2011,

Type: Article in proceedings - Article in proceedings

Presented at: 19th International Conference on Computer Graphics, Visualization and Computer Vision, Plzen

Cut Locus Construction using Deformable Simplicial Complexes

Misztal, Marek Krzysztof ; Bærentzen, J. Andreas ; Anton, François ; Markvorsen, Steen

part of: 2011 Eighth International Symposium on Voronoi Diagrams in Science and Engineering (ISVD) (ISBN: 978-1-4577-1026-1), pages: 134-141, 2011, IEEE,

Type: Article in proceedings - Article in proceedings

Presented at: 8th International Symposium on Voronoi Diagrams in Science and Engineering, Qingdao

DOI: 10.1109/ISVD.2011.26

Geometrical characterization of interconnected phase networks in three dimensions

Jørgensen, Peter Stanley ; Hansen, Karin Vels ; Larsen, Rasmus ; Bowen, Jacob R.

in journal: Journal of Microscopy (ISSN: 0022-2720) (DOI: http://dx.doi.org/10.1111/j.1365-2818.2011.03504.x), vol: 244, issue: 1, pages: 45-58, 2011

Type: Journal article - Journal article

DOI: 10.1111/j.1365-2818.2011.03504.x

3D Surface Scanner Using Structured Light & Industrial Robot

Stets, Jonathan Dyssel ; Dahl, Anders Lindbjerg ; Aanæs, Henrik

Type: Poster - Poster

Presented at: Visionday : Industial, Lyngby, Denmark

Improved Nowcasting of Heavy Precipitation Using Satellite and Weather Radar Data

Vestergaard, Jacob Schack ; Nielsen, Allan Aasbjerg ; Larsen, Rasmus ; Bøvith, Thomas

Type: Poster - Poster

Presented at: Visionday : Industial, Lyngby, Denmark

Supercontinuum Light Sources for Hyperspectral Subsurface Laser Scattering

Nielsen, Otto Højager Attermann ; Dahl, Anders Lindbjerg ; Larsen, Rasmus ; Møller, Flemming ; Nielsen, Frederik Donbæk ; Thomsen, Carsten L. ; Aanæs, Henrik ; Carstensen, Jens Michael

part of: Image Analysis (ISBN: 978-3-642-21226-0), pages: 327-337, 2011, Springer,

Type: Article in proceedings - Article in proceedings

Presented at: 17th Scandinavian Conference on Image Analysis (SCIA), Ystad

DOI: 10.1007/978-3-642-21227-7_31

Geometric calibration between PET scanner and structured light scanner

Kjer, Hans Martin ; Olesen, Oline Vinter ; Paulsen, Rasmus Reinhold ; Højgaard, Liselotte ; Roed, Bjarne ; Larsen, Rasmus

part of: Proceedings of the MICCAI workshop on Mesh Processing in Medical Image Analysis (MeshMed), 2011,

Type: Article in proceedings - Article in proceedings

Presented at: MICCAI workshop on Mesh Processing in Medical Image Analysis, Toronto, Canada

3D Surface Realignment Tracking for Medical Imaging: A Phantom Study with PET Motion Correction

Olesen, Oline Vinter ; Paulsen, Rasmus Reinhold ; Jensen, Rasmus Ramsbøl ; Keller, Sune H. ; Sibomana, Merence ; Højgaard, Liselotte ; Roed, Bjarne ; Larsen, Rasmus

part of: Proceedings of the MICCAI workshop on Mesh Processing in Medical Image Analysis (MeshMed), 2011,

Type: Article in proceedings - Article in proceedings

Presented at: MICCAI workshop on Mesh Processing in Medical Image Analysis, Toronto, Canada